<?php
/***************************************************************
*
* (c) 2015 Chi Hoang ([email protected])
* All rights reserved
*
***************************************************************/
require_once ("ahocorasick.php");
//////////////////////////////
//$tree = new Ahocorasick\Ahocorasick();
//$tree->add ("a");
//$tree->add ("ab");
//$tree->add ("bab");
//$tree->add ("bc");
//$tree->add ("bca");
//$tree->add ("c");
//$tree->add ("caa");
//echo $tree->match ("abccab");
//////////////////////////////
//$tree = new Ahocorasick\ahocorasick();
//$tree->add ("bc");
//$tree->add ("abc");
//echo $tree->match ("tabc");
//////////////////////////////
//$tree = new Ahocorasick\Ahocorasick();
//$tree->add("ananas");
//$tree->add("antani");
//$tree->add("assassin");
//echo $tree->match("banananassata");
//////////////////////////////
//$tree = new Ahocorasick\ahocorasick();
//$tree->add("he");
//$tree->add("she");
//$tree->add("his");
//$tree->add("hers");
//echo $tree->match("ushers");
/////////////////////////////
//$tree = new Ahocorasick\Ahocorasick();
//$tree->add("bot");
//$tree->add("otis");
//$tree->add("ott");
//$tree->add("otto");
//$tree->add("tea");
//echo $tree->match("botttea");
//$tree = new Ahocorasick\Ahocorasick();
//$tree->add("fast");
//$tree->add("sofa");//$tree = new Ahocorasick\Ahocorasick();
//$tree->add("fast");
//$tree->add("sofa");
//$tree->add("so");
//$tree->add("take");
//echo $tree->match("takesofasofastfassofatakesossosofastakeso");
//$tree->add("so");
//$tree->add("take");
//echo $tree->match("takesofasofastfassofatakesossosofastakeso");
//$tree = new Ahocorasick\Ahocorasick();
//$tree->add("one");
//$tree->add("two");
//$tree->add("three");
//$tree->add("four");
//echo $tree->match("Hey one! How are you?");
//$tree = new Ahocorasick\Ahocorasick();
//$tree->add("hi");
//$tree->add("hips");
//$tree->add("hip");
//$tree->add("hit");
//$tree->add("chip");
//echo $tree->match("microchips");
//$tree = new Ahocorasick\Ahocorasick();
//$tree->add("ab");
//$tree->add("bc");
//$tree->add("bab");
//$tree->add("d");
//$tree->add("abcde");
//echo $tree->match("xbabcdex");
//$tree = new Ahocorasick\Ahocorasick();
//$tree->add("The");
//$tree->add("han");
//$tree->add("and");
//$tree->add("pork");
//$tree->add("port");
//$tree->add("pot");
//$tree->add("ha");
//$tree->add("e");
//echo $tree->match("The pot had a handle");
//$tree = new Ahocorasick\Ahocorasick();
//$tree->add("mercury");
//$tree->add("venus");
//$tree->add("earth");
//$tree->add("mars");
//$tree->add("jupiter");
//$tree->add("saturn");
//$tree->add("uranus");
//$tree->add("pluto");
//echo $tree->match("XXearthXXvenusaturnXXmarsaturn","ea*turn");
//$tree = new Ahocorasick\Ahocorasick();
//$tree->add("say");
//$tree->add("she");
//$tree->add("shr");
//$tree->add("he");
//$tree->add("her");
//echo $tree->match("yasherhs");
$tree = new Ahocorasick\Ahocorasick();
$tree->add("AC");
$tree->add("GTG");
$tree->add("AACT");
//////echo $tree->match("ACCGAGTGCGTGGACAAACTACGATTGTGGAATGAACT");
echo $tree->match("ACCGAGTGCGTGGACAAACTACGATTGTGGAATGAACT","AC*GT");
?>
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